Talks
Invited Talk
Guest Lecture
Conference / Workshop
Award Nomination
Dissertation Defense
Invited Talks & Guest Lectures
2024
Invited Talk
Exploring Computational Reproducibility in Jupyter Notebooks: Insights and Challenges
The Spring Symposium 2024 of the Fachgruppe Database Systems (FG DB) — March 12, 2024
Guest Lecture
Reproducible Research with Data Provenance
University of Passau — January 24, 2024
Invited Talk
Exploring Metadata for ML and DL Pipelines for Reproducibility
InsectAI COST Action — Image Analysis Metadata Workshop, Virtual — June 7, 2024
2022
Invited Talk
Reproducible Research: Responding to 6W and 1H Questions of Data Provenance
HEIBRiDS Lecture Series at Einstein Center Digital Future — Berlin, Germany — January 5, 2022
2021
Invited Talk
The Story of an Open Science Experiment
Max Planck Digital Library (MPDL) Open Science Days 2021 — October 20, 2021
Invited Talk
Provenance and Reproducibility: A Look into Jupyter Notebooks
Thuringian RDM Days “Data documentation: A love note to the future!” — June 22, 2021
2020
Invited Talk
Contributions to Open Science for Reproducible Research
QPTData Open Science Workshop 2020 — January 23, 2020
Conference & Workshop Talks
2023
Conference
Data Provenance for Reproducible Research
Dagstuhl Seminar 23372 “Human-Centered Approaches for Provenance in Automated Data Science” — September 13, 2023
Workshop
Towards an Ontology Network Framework for Fostering Scientific Study Reproducibility and Interoperability
Microverse Symposium — Jena — September 5, 2023
Conference
Computational Reproducibility of Jupyter Notebooks from Biomedical Publications
Daniel Mietchen, Sheeba Samuel — JupyterCon — Paris, France — May 10, 2023
Workshop
MLProvLab: Provenance Management for Data Science Notebooks
Workshop on Data Engineering for Data Science (DE4DS) co-located with BTW 2023 — March 7, 2023
Workshop
A Virtual “Werkstatt” for Digitization in the Sciences
AIX Sciences Jena, ELLIS Unit Jena in collaboration with the Carl-Zeiss Foundation — November 27, 2023
Conference
How Reproducible are the Results Gained with the Help of Deep Learning Methods in Biodiversity Research?
Waqas Ahmed, Vamsi Krishna Kommineni, Birgitta König-Ries, Sheeba Samuel — TDWG 2023 — Australia — October 9–13, 2023
2021
Conference
Towards Tracking Provenance from Machine Learning Notebooks
13th International Joint Conference on Knowledge Discovery, Knowledge Engineering and Knowledge Management (KDIR) — October 27, 2021
Workshop
Towards an Ontology Network for the Reproducibility of Scientific Studies
8th International Workshop on Ontologies and Conceptual Modeling (OCAS) co-located with FOIS 2021 — September 13, 2021
Award Nomination
ProvBook — Award Nomination for RDM Solutions
NFDI4Ing Conference — September 27, 2021
Award Nomination
ReproduceMeGit — Award Nomination for RDM Solutions
NFDI4Ing Conference — September 27, 2021
Award Nomination
MLProvLab — Award Nomination for RDM Solutions
NFDI4Ing Conference — September 27, 2021
2020
Conference
ProvBook: Capturing and Visualizing Provenance in Jupyter Notebooks for Reproducibility
JupyterCon 2020 — October 13, 2020
Conference
Analyzing the Use and Reproducibility of Jupyter Notebooks Using ReproduceMeGit
JupyterCon 2020 — October 13, 2020
Workshop
ReproduceMeGit: A Visualization Tool for Analyzing Reproducibility of Jupyter Notebooks
Provenance Week 2020 — June 22, 2020
Workshop
Machine Learning Pipelines: Provenance, Reproducibility and FAIR Data Principles
Provenance Week 2020 — June 22, 2020
Workshop
Contributions to Open Science for Understandability, Reproducibility and Reuse of Scientific Experiments
Birgitta König-Ries, Sheeba Samuel — Microverse Symposium 2020
Workshop
Towards Integrative Data Management for Research on the Dynamic Balance of Microbial Communities
Maria Sorokina, Martin Hohmuth, David Schöne, Sheeba Samuel, Roman Gerlach, Aurélie Jost, Christoph Steinbeck, Birgitta König-Ries — Microverse Symposium 2020
2019
Dissertation Defense
A Provenance-based Semantic Approach to Support Understandability, Reproducibility, and Reuse of Scientific Experiments
PhD Dissertation Defense — Friedrich Schiller University Jena — December 20, 2019
2018
Conference
Provenance-based Semantic Approach for the Reproducibility of Scientific Experiments
ICEI 2018 — 10th International Conference on Ecological Informatics — September 27, 2018
Workshop
The Story of an Experiment: A Provenance-based Semantic Approach towards Research Reproducibility
SWAT4HCLS 2018 — 11th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences — December 4, 2018
2017
Conference
Integrative Data Management for Reproducibility of Microscopy Experiments
14th Extended Semantic Web Conference (ESWC) 2017 — PhD Symposium — May 29, 2017
2016